柑橘胁迫响应基因WRKY47的克隆与表达分析
2021-03-25沈丹杨莉胡威匡柳青郭文芳卢婷刘德春刘勇
沈丹 杨莉 胡威 匡柳青 郭文芳 卢婷 刘德春 刘勇



摘要: 以檸檬[Citrus limon (L.) Burm.f.]、甜橙[Citrus sinensis (L.) Osbeck]、芦柑(Citrus reticulata Blanco)、金柑[Fortunella japonica (Thunb.) Swingle]为试验材料,基于甜橙基因组数据库中的甜橙基因碱基序列,利用RT-PCR方法克隆获得4个WRKY家族基因ClWRKY47、CsWRKY47、CrWRKY47和FjWRKY47的cDNA全长碱基序列。序列分析结果表明,这4个基因的cDNA全长都是1 567 bp,开放阅读框为1 506 bp,编码501个氨基酸。氨基酸序列和结构分析结果显示,这4个基因编码的蛋白质属于Group IIa+IIb类WRKY蛋白。进化树分析结果显示,所克隆的4个柑橘WRKY蛋白与克莱门柚WRKY47蛋白的亲缘关系最近。对CsWRKY47启动子顺式作用元件预测分析,发现CsWRKY47启动子包含脱落酸响应元件(ABRE)、茉莉酸甲酯响应元件(CGTCA-motiF)、抗氧化响应元件(ARE)、参与干旱诱导的MYB结合位点(MBS)等多个与胁迫相关的顺式作用元件。实时荧光定量表达分析结果表明,柠檬ClWRKY47和甜橙CsWRKY47能被高盐、干旱、低温胁迫诱导表达;芦柑CrWRKY47在干旱和低温胁迫下诱导表达,高盐胁迫下表达量下调;金柑FjWRKY47 在高盐胁迫下诱导表达,干旱和低温胁迫下下调表达。为进一步开展柑橘胁迫相关基因WRKY47的功能鉴定奠定了基础。
关键词: 柑橘;WRKY;非生物胁迫;基因克隆;表达分析
中图分类号: Q785 文献标识码: A 文章编号: 1000-4440(2021)01-0129-10
Cloning and expression analysis of stress response gene WRKY47 in citrus
SHEN Dan, YANG Li, HU Wei, KUANG Liu-qing, GUO Wen-fang, LU Ting, LIU De-chun, LIU Yong
(College of Agriculture, Jiangxi Agricultural University, Nanchang 330045, China)
Abstract: Based on the Citrus sinensis gene base sequences contained in the sweet orange genome database, the cDNAs sequences of four WRKY family genes ClWRKY47, CsWRKY47, CrWRKY47 and FjWRKY47 were cloned from lemon [Citrus limon (L.) Burm.f.], sweet orange [Citrus sinensis (L.) Osbeck], ponkan (Citrus reticulata Blanco) and kumquat [Fortunella japonica (Thunb.) Swingle] by RT-PCR, respectively. The results of sequence analysis showed that the cDNA of these four genes were 1 567 bp in length, the open reading frame (ORF) was 1 506 bp, and 501 amino acids were encoded. The results of amino acid sequence and structure analysis demonstrated that the proteins encoded by these four genes belonged to the Group IIa+IIb WRKY protein. Phylogenetic tree analysis results indicated that the four citrus WRKY proteins were closely related to the Citrus clementine WRKY47 protein. Predictive cis-acting element analysis of CsWRKY47 promoter revealed that CsWRKY47 promoter contained abscisic acid response element (ABRE), methyljasmonic acid response element (CGTCA-motiF), anaerobic response element (ARE), MYB binding site involved in drought-response (MBS) and many other stress-related cis-acting elements. Real-time fluorescence quantitative PCR analysis suggested that the expression levels of ClWRKY47 and CsWRKY47 were induced by drought, low temperature and high salt. Besides, the expression of CrWRKY47 was induced under drought and low temperature stress, but suppressed under high salt stress. However, the expression level of FjWRKY47 was upregulated under high salt stress and suppressed under drought and low temperature stress. These results lay a foundation for further functional identification of the stress-related gene WRKY47 in citrus.
Key words: citrus;WRKY;abiotic stress;gene cloning;expression analysis
植物的生长发育过程很大程度上受环境的影响,其中非生物胁迫主要为干旱、高盐以及低温。在非生物胁迫信号的感知以及生理和生化反应上,植物自身已经进化出应对胁迫的各种复杂的响应机制。简单的说,植物可以通过一系列胁迫信号转导和调控相关基因来响应非生物胁迫[1-2]。这些非生物胁迫响应基因按功能可以分为两大类,即调控型基因和功能型基因。……
