提取板栗DNA的CTAB法和SDS法的比较
2012-04-29王少斌程水源王燕许锋姜德志陈慧娟李琳玲程华
王少斌 程水源 王燕 许锋 姜德志 陈慧娟 李琳玲 程华
摘要:分别采用十六烷基三乙基溴化铵(CTAB)法和十二烷基磺酸钠(SDS)法提取板栗(Castanea mollissima BL.)基因组DNA,取适量DNA进行琼脂糖凝胶电泳,并利用紫外可见分光光度计测定所提取的DNA在260和280 nm的吸光度及其比值,利用Eco RⅠ和MseⅠ双酶切后进行随机扩增长度多态性(AFLP)分析。结果表明,两种方法均能从板栗中提取出一定质量的、比较完整的、纯度比较高的DNA,SDS法提取的板栗DNA的纯度更高、质量更好。
关键词:板栗(Castanea mollissima BL.);DNA提取;十六烷基三乙基溴化铵(CTAB)法;十二烷基磺酸钠(SDS)法;随机扩增长度多态性(AFLP)
中图分类号:Q503文献标识码:A文章编号:0439-8114(2012)14-3101-03
Comparison of CTAB and SDS Methods for DNA Extracion of Chestnut
WANG Shao-bin1,CHENG Shui-yuan2,3,WANG Yan2,XU Feng1,JIANG De-zhi1,2,CHEN Hui-juan1,
LI Lin-ling2,3,CHENG Hua2,3
(1. College of Horticulture and Gardening, Yangtze University, Jingzhou 434025, Hubei, China;
2. Hubei Key Laboratories of Economic Forest Germplasm Improvement and Comprehensive Utilization of Resources, Huanggang 438000, Hubei, China; 3. College of Chemistry and Life Science, Huanggang Normal University, Huanggang 438000, Hubei, China)
Abstract: Genomic DNA of chestnut(Castanea mollissima BL.) was extracted by CTAB method and SDS method. The DNA extracted was tested by agarose gel electrophoresis and spectrophotometry, and then double digested by EcoRⅠ and MseⅠ for AFLP. The results showed that the DNA extracted by both methods was with good quality and high purity while DNA extracted by SDS method was with higher quality and purity compared with CTAB method.
Key words: Castanea mollossima BL.; DNA extraction; CTAB method; SDS method; AFLP
板栗(Castanea mollissima BL.)是壳斗科栗属落叶乔木,是一种重要的园艺作物,其经济栽培价值高[1]。迄今为止,人们对板栗的研究很多,但多集中于板栗的种植、病虫害防治及板栗壳的利用等方面,而对板栗基因组DNA的研究相对较少。基因组DNA的提取及DNA分子标记的应用是构建基因文库和遗传图库等分子生物学研究的基础[2-4]。由于板栗富含酚类、糖类、脂肪、色素以及单宁等次生代谢物,给获得板栗基因组DNA带来了较大困难,提取高质量DNA更加不易。此外,传统方法提取的DNA得率低、纯度低,难以进行酶切及PCR扩增,进而影响随机扩增长度多态性(AFLP)等技术在板栗上的应用。采用十六烷基三乙基溴化铵(CTAB)法和十二烷基磺酸钠(SDS)法分离板栗基因组DNA,通过比较这两种方法提取的DNA的质量,以期优化板栗高质量DNA模板提取的方法,旨在为板栗的分子水平研究打下基础。……
