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丁酸钠对EB病毒阳性胃癌细胞EB病毒活化的影响及其机制

2025-07-07田昭鑫陈钰英刘雯

精准医学杂志 2025年3期
关键词:关键检测研究

[中图分类号] R394;R735.2 [文献标志码] A

Effect and mechanism sodium butyrate on the activation Epstein-Barr virus in Epstein-Barr virus-positive gastric cancer cellsTIAN , CHEN ,LIU ( , , , ,)

[ABSTRACT]ObjectiveTo investigate theeffectand mechanism sodium butyrate(NaB)ontheactivation EpsteinBarr virus(EBV)inEBV-positivegastriccancercells.MethodsEBV-positivegastriccancercells(AGS-EBVcells)weredivided nto groups A,B,andC,and thecels in groupA were culturedroutinelyfor12 hours,while those in groups Band C were treated withNaBfor12and 24hoursrespectively.Transcriptomesequencingwas performedforthe genes AGS-EBVcelsand theEBV genes,and groups A,B,andCwerecomparedinterms therelative expressionlevelskeylatent genes and keylytic genes EBVincels.Dierentiallyexpressed genes(DEGs)were identifiedbetweengroupsA,B,andC,andthe top5upregulated DEGs and the top 5 downregulated DEGs with smaller P values were considered significant DEGs,while RT-qPCR was used to measuretherelativeexpresionlevels significantDEGs.TheGOfunctionalenrichmentanalysisandthe KEGG pathwayenrichmentanalysis were performed forallDEGs identified,andthe proteins enriched in significant pathways(the pathways with Plt;0.05 in the KEGG pathway enrichment analysis)were considered key pathway proteins,while Western blotting was used to mea-sure therelative expression levels key pathway proteinsin groups A, B,and C.TheDEGs in groupsA,B,andCwere comparedwith the transcription factors in the AnimalTFDB/PlantTFDB database,and the top5 transcription factors with smaler P values were se lectedascoretranscriptionfactors,whileRT-qPCR wasused tomeasuretherelativeexpresionlevelscoretranscriptionfactors in groups A,B,andC.ResultsCompared with group A,groups Band Chad significantincreases in therelative expresionlevels key latent genes(EBNA-1,EBNA-3A,EBNA-3B,EBNA- 3C ,EBNA .LP LMP-I ,LMP-2A,LMP-2B and RPMS1) and lytic period genes(BZLF1,BRLF1 and BHLF1)( :t=2.67-14.36,Plt;0.05) ,and group C had significantly higher expression levels these genes than group B (t=2.21-6.97,Plt;0.05) .Compared with group A,groupB had significant increases in the relative expression levels SCN1A,RFPL4AL1, RORB ,and CACNG7 in cells (t=2.81-13.93,Plt;0.05) and significant reductions in the relative expression levels MIR205HG , PLAAT4 , and OAS2 (t=4.47-623.30,Plt;0.05) ; compared with group A,group C had significant increases in the relative expression levels NLRP5 ,SCN1A,RFPL4AL1,RORB,CACNG7,and PLA2G2E Ωt=4.32-7.43 Plt;0.05 )and significant reductions in the relative expresson levels RS17P11,MIR205HG, PLAAT4 ,and OAS2 .Compared with group A in terms the core transcription factors,groups B and C had significant increases in the relative mRNA expression levels EGR1, PGR ,and SOX2 ( t=3.22-16.60,Plt;0.05) and significant reductions in the relative mRNA expression levels CEBPD andE2F3( t=4.18-28.59,Plt;0.05) .Compared with group A,group B had significant reductions in the relative expression levels p65,p-p65,AKT,and p-AKT 0.05),and compared withgroupA,groupChadsignificantreductions intherelativeexpresionlevels p65,p-p65,AK,and p-AKT and a significant increase in the expression level p -ERK ⋅t=5.72-8.92,Plt;0.05) .ConclusionNaB promotes the activation EBV inEBV-positive gastric cancercels byactivating the MAPK signaling pathwayand inhibiting the NF- κB pathway, andthecoretranscriptionfactorEGRlpromotestheactivationthevirusbyfacliatingthetranscriptiontheEBVlyticgenes BZLF1 and BRLF1.

[KEY WORDs]Herpesvirus 4,human; Butyric acid; Virus activation;Gene expression regulation; Stomach neoplasms; In vitro techniques

EB病毒相关胃癌(Epstein-Barr virus-associa-tedgastriccancer,EBVaGC)是胃癌的一种独特的分子亚型[1-2]。EB 病毒(EBV)主要感染口咽部上皮细胞和B细胞,并在外周血记忆B细胞中建立长期潜伏感染状态[3]。EBV处于潜伏感染状态时复制被抑制,仅有少数潜伏期基因表达,以维持其潜伏状态[4-5]。在某些特定条件下,如机体免疫功能减弱或受到某些物理化学因素刺激后,病毒基因的启动子可能会被重新活化,启动病毒进人裂解期,并表达大量的裂解期基因[]。丁酸钠(NaB)是一种组蛋白去乙酰化酶抑制剂,属非细胞毒类抗癌化合物,可影响细胞内多种表观遗传调控机制,包括组蛋白的超乙酰化、DNA的甲基化及非组蛋白的修饰等过程]有研究显示,NaB能够诱导EBV从潜伏期进入裂解期[8-10]。但目前关于NaB诱导EBV活化的具体机制尚不明确。本研究通过对NaB处理不同时间点的EBV阳性胃癌细胞进行转录组测序,筛选出差异表达基因(DEGs)并进行生物信息学分析,同时对分析的结果进行初步验证,以全面了解NaB诱导EBV裂解复制的分子机制。

1材料与方法

1.1 细胞的分组和处理

将EBV阳性胃癌AGS-EBV细胞(中山大学第三附属医院赠予)置于含有 10% 胎牛血清、青霉素(0.1U/L) 和链霉素 (100mg/L) 的DMEM培养基(完全培养基)中,于 、含体积分数 0.05CO2 的湿润环境中培养,当细胞密度约达 70% 时分为 A~ C组,每组均设置3个复孔。A组细胞在完全培养基中常规培养 12h ;分别于B组和C组的完全培养基中加入 3mmol/L 的NaB后,B组细胞继续培养12h,C 组细胞继续培养 24h 。

1.2 A~C 组细胞中EBV基因的检测、转录组测序 和DEGs的富集分析

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