黄瓜果顶形状遗传与QTL定位
2021-08-23李毅宋晓飞李晓丽孙成振张美迪闫立英
李毅 宋晓飞 李晓丽 孙成振 张美迪 闫立英



摘 要:对黄瓜果顶形状进行QTL分析和候选基因预测,可为黄瓜新品种选育提供理论基础。以果顶平头形自交系玉女和果顶瘦尖形自交系R7构建的F2代分离群体为材料,对黄瓜果顶形状遗传及其QTL进行分析。结果表明,黄瓜果顶瘦尖形为不完全显性遗传的数量性状。基于QTL-Seq发现6个与黄瓜果顶形状有关的QTL,分别位于1号、2号、3号、4号、5号和6号染色体上,共包含108个SNP和InDel位点,含有12个变异基因。其中只有6号染色体上的CsaV3_6G005930.1基因在外显子上发生SNP替换(C-A)形成终止密码子,导致翻译提前终止,预测 CsaV3_6G005930.1是与果顶形状相关的候选基因,该基因编码一个未知蛋白。
关键词:黄瓜;果顶形状;QTL定位
中图分类号:S642.2 文献标志码:A 文章编号:1673-2871(2021)07-007-07
Inheritance and QTL mapping of fruit apex shape in cucumber
LI Yi, SONG Xiaofei, LI Xiaoli, SUN Chengzhen, ZHANG Meidi, YAN Liying
(College of Horticulture Science and Technology, Hebei Normal University of Science and Technology, Qinhuangdao 066600, Hebei, China)
Abstract: QTL analysis and candidate genes prediction of the fruit apex shape can provide a theoretical foundation for the breeding of new cucumber varieties.In this study, the genetic and QTL of fruit apex shape were analyzed by using F2 population which was constructed with an inbred line of flat fruit apex Yunü (P1) and an inbred line of sharp fruit apex R7 (P2) as parents.Genetic analysis showed that the fruit sharp apex of cucumber was a quantitative character with incomplete dominant inheritance. Six QTLs related to fruitapex shape of cucumber were located on chromosome 1, chromosome 2, chromosome 3, chromosome 4, chromosome 5 and chromosome 6 by QTL-Seq, respectively. A total of 108 SNP and InDel locus which related to the fruit apex shape were located,contained 12 mutation genes.Only the CsaV3_6G005930.1 gene on chromosome 6 happened a SNP replacement (C-A) to form the termination codon, and resulted in premature termination of translation. Therefore, CsaV3_6G005930.1 is a strong candidate gene for fruit apex shape, which encodes an unknown protein.
Key words: Cucumber; Fruit apex shape; QTL mapping
黃瓜是全球重要的经济作物,其果实大小和形状具有丰富的多样性[1]。不同黄瓜品种之间果实形状差异很大,如长棒形、短棒形、卵圆形、球形和指形黄瓜等。果实形状直接影响黄瓜的外观品质和商品价值,因此,培育符合消费者需求的果形品种已成为黄瓜新品种选育的重要方向之一[2]。果顶是黄瓜果实的重要组成部分,果顶形状的改变直接影响果实的形状。因此,定位果顶形状相关QTL可为黄瓜果形遗传改良提供理论依据。
辣椒、茄子和番茄作物的果顶形状均为数量性状且由多个QTL调控。Chaim等[3]通过QTL分析鉴定到55个与辣椒形状相关的QTL,其中有3个QTL与辣椒果顶形状有关。张佳琦[4]利用小椒和大椒杂交构建F2分离群体,利用SPAR和SSR分子标记对其进行QTL分析,定位到6个与辣椒果顶形状相关的QTL。……
