甜荞FeFUL2基因的克隆与表达分析
2021-06-29张良波王旋钱成旭刘志雄
张良波 王旋 钱成旭 刘志雄



摘 要: 為了探索甜荞FUL同源基因参与花与籽粒发育调控的分子机制,该文采用同源克隆的方法从甜荞(Fagopyrum esculentum)长花柱和长雄蕊突变体(lpls)中克隆到1个长837 bp 的FeFUL2基因(GenBank登录号为MG779493.1),其包含长690 bp的完整开放阅读框,编码1个由229个氨基酸残基组成的MADS-box转录因子。通过对FeFUL2进行分子系统发生、同源蛋白比对与转录因子结构分析,结果显示FeFUL2与核心真双子叶植物AP1/FUL亚家族转录因子中的euFUL进化系聚于1个进化分支,属甜荞euFUL型MADS-box转录因子,且包含1个57个氨基酸残基长的高度保守的MADS结构域、1个69个氨基酸残基长的次级保守的K结构域,其C末端转录激活区在序列长度和氨基酸残基组成上与其他euFUL型转录因子差异较大,但仍含有2个euFUL型转录因子特有的保守基元:FUL motif和paleo AP1 motif。用qPCR检测基因表达的组织特异性显示:FeFUL2基因在甜荞lpls突变体的根、茎、叶、花被片、雄蕊、雌蕊和发育4 d的幼果中均有表达,但其在花被片中表达量极显著高于该基因在其他器官中的表达量(LSD, P<0.01)。综合转录因子的结构与基因的表达模式推测,FeFUL2基因与其他euFUL型基因的功能可能存在一定差异,其在花发育过程中可能主要参与甜荞花被片的发育调控。
关键词: 荞麦, 花发育, FRUITFULL, MADS-box, 基因表达
中图分类号: Q943.2
文献标识码: A
文章编号: 1000-3142(2021)04-0591-07
Abstract: In order to uncover the molecular mechanisms of FRUITFULL (FUL) homologous genes involving in regulating flower and fruit development in buckwheat, an 837 bp of FeFUL2 cDNA containing a 690 bp full ORF (Open Reading Frame) encoding 229 amino acids (GenBank Accession Number MG779493.1) was isolated from a Fagopyrum esculentum mutant line with long pistil and long stamen (lpls) through homologous cloning. Moreover, the FeFUL2 cDNA contains a 30 bp 5′UTR (untranslated region, UTR) and a 117 bp 3′UTR including poly-A. The results showed that the buckwheat FeFUL2 was classified into the core eudicot euFUL lineages of AP1/FUL subfamily MADS-box transcription factors through phylogenetic, protein alignment and sequence analyses. In addition, FeFUL2 was classified transcription contained a highly conservation MADS-box domain (1-57) with 57 amino acids (aa), a secondary conserved K domain (91-159) with 69 aa, as well as two conserved motifs: FUL motif and paleo AP1 motif lying variable C terminal region. The highly conserved MADS domain was responsible for DNA binding, dimerization and nuclear localization of MADS-domain transcription factors. The secondary conserved K domain was involved in the formation of amphipathic helices and responsible for protein dimerization and multimeric complex formation protein-protein interactions. Finally, the C domain was important for transcriptional activation and multimeric complex formation. Moreover, the C terminal region of FeFUL2 was variable in sequence and length comparing with other euFUL-like transcriptors, which suggested that FeFUL2 may play different roles regulating flower and fruit development with FUL-like homologs from other species. qPCR revealed that FeFUL2 expression was detectable in all tissues including root, stem, leaf, tepal, stamen, gynoecium and 4-day-old juvenile fruit. However, FeFUL2 expression level in tepal was significantly higher than those in other organs (LSD, P<0.01). In addition, FeFUL2 expression level in stamen, gynoecium and 4-day-old juvenile fruit displayed no significant differences(LSD,P>0.05), but FeFUL2 expression level in stem and leaf was significantly higher than root (LSD,P<0.05). However, FeFUL2 expression level in stem and leaf showed no significant differences(LSD,P>0.05). Above all, our data suggest that the function of FeFUL2 may show a difference with other euFUL-like gene, and FeFUL2 play a major role involving in perianth development.
Key words: buckwheat, flower development, FRUITFULL, MADS-box, gene expression
甜荞(Fagopyrum esculentum)是蓼科(Polygonaceae)荞麦属食用和保健兼用的粮食作物,其籽粒含有丰富的赖氨酸、膳食纤维、芦丁和抗氧化活性物等,具有很高的营养和保健功效(Quinet et al., 2004; Li et al., 2017);作为典型的二型花柱作物,甜荞自然群体中thrum型(短花柱长雄蕊)和pin型(长花柱短雄蕊)花植株按1∶1分离,自花或相同花型植株间授粉不亲和,仅异型花植株间相互授粉才能正常结实,产量低,不利于开展杂交育种工作,成为制约这一重要经济作物推广应用的瓶颈(Li et al., 2017)。……
